species:   Rhirr
pid:       PID1183
parent:    Locus_1596
paralog:   
locus:     scaffold_245:162243-162808
matures:   ['UAACAGAAGUUGUUGGAUU', 'ACCAACACCUAAUUUGUUACC']
srr:       ERR2841790
genome:    /Users/jax/+Genomes/Fungal_genomes/Rhirr.Rhiir2_1_AssemblyScaffolds.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Silvestri2019-js.ERR2841790.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Silvestri2019-js.ERR2841790.cram scaffold_245:162243-162808

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

                                              ***********************                           *********************                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
UAAUGGAUUAAAUAAACGAGAAAAGGACGACUUAUCAUUUCGAGCAAAACCAACACCUAAUUUGUUACCUUACCGUCCAAGAAAAUCAGCUAAACCUAUAACAGAAGUUGUUGGAUUUAAGCUCCAUACUGAUGCACGCCUUGAAAAACGCAAAACAUAUGAUGAACAGAGAAACUUACGUGACCAAGAAGAAAAGAUACUAAAAGAACGAAAACAAAUAGAGGAGGUACGAUAUAUAAAACAUUUAUAUUUGAAACACGAUGAUCAUAAGUAAAUUCGAAAUACAUUUAAAAAUUAUAUUAAGGAACGUAAUAAACAACAAAUUCGUCAAUUGAGAACUGAAUUAAUACACCAUGCUCAGCCAGCCAAAAGGUAUGCGCCCGUCAAAAUAGAAUUUGCAAACCGAAAAGUAACCAAACCCGUUUCACCACUGAUUGGGGAGAAAAGGCGUAAAAAAUUACAAGCAUUAAAUGAAUCCAAUAUUCGUAAUGCAAUGUCGGAGAACGCUUCAACAGCAAAAAUAGUUCCCCAAUCCAAAAAUAAUAAUAGGAAGCUAUAGAAAAGAA
.(((((................((((.((...(((((....(((((((.((((((.((..(((((((...............................))))))))).)))))).)))..)))).....)))))..)))))).................(((((((.........((((((..((............................................(((.(((((((...)))))))))).....(((...............)))........................)).))))))...........)))))))(((((........))))).......(((.....))).....(((.((((....((......))...)))).)))...............)))))........((((((((((.....((((((....))))..(((((..((((((.....)))))))))))..(((.((((....)))).)))))........))))))))))...........((((....)))).........
--------------------------------------------------------------------------------------------------UAACAGAAGUUGUUGGAUU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=19 a=0 c
------------------------------------------------ACCAACACCUAAUUUGUUACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=0 c*
--------------------------------------------------------------------------------------------------UAACAGAAGUUGUUGGAUU----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=19 a=0 ma
------------------------------------------------ACCAACACCUAAUUUGUUACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=0 ma*


No alignments to locus

mb-01011
ax-1010001
ku-01
ss-000000011100
fn-001
